BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F09SP1|AL427192
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1712 1860 0.0
>3x_Contig1712
Length = 23668
Score = 1860 bits (937), Expect = 0.0
Identities = 942/945 (99%)
Strand = Plus / Plus
Query: 1 gatctttgcagcaagtactaatggcaaaattgaaaccgcattaattcttttcttttcctt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5646 gatctttgcagcaagcactaatggcaaaattgaaaccgcattaattcttttcttttcctt 5705
Query: 61 caacatatacaggctgttttcttcgcctaattacgtttgctctctacctagttattagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5706 caacatatacaggctgttttcttcgcctaattacgtttgctctctacctagttattagtt 5765
Query: 121 tttgatttatatctccgcttccacctaagagatcatatcacctaaaagatattaattgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5766 tttgatttatatctccgcttccacctaagagatcatatcacctaaaagatattaattgaa 5825
Query: 181 atatcgggggtatgcatccgttggtatgtatcattatcgtttaattcacaaaatacttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5826 atatcgggggtatgcatccgttggtatgtatcattatcgtttaattcacaaaatacttcc 5885
Query: 241 acagtttaacggctcgacaacattattttaagatcaacactgataaggctcctctaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5886 acagtttaacggctcgacaacattattttaagatcaacactgataaggctcctctaatac 5945
Query: 301 gcatcgagttcatctgtaatttggaaagtactttacctttgcaagtcaaactccattttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5946 gcatcgagttcatctgtaatttggaaagtactttacctttgcaagtcaaactccattttt 6005
Query: 361 taaaccccgatatagaaaagttgcaactgcagagccattctgttaaaacggatttcagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6006 taaaccccgatatagaaaagttgcaactgcagagccattctgttaaaacggatttcagat 6065
Query: 421 gtcttatttctggctgctgtgtactaaataaagacattctacctgatatttagcaaatka 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6066 gtcttatttctggctgctgtgtactaaataaagacattctacctgatatttagcaaatta 6125
Query: 481 cgaatacctcgtctggattttctctagctataattatctttcttttttttctttttgcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6126 cgaatacctcgtctggattttctctagctataattatctttcttttttttctttttgcat 6185
Query: 541 gtaccgtgcgcacggattgtacgatgttggatcttccgttgcaaatcaagataattgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6186 gtaccgtgcgcacggattgtacgatgttggatcttccgttgcaaatcaagataattgaaa 6245
Query: 601 aagtgtccccccccaatagcattgataaaccgttggtcagtacggcagcggtttgcattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6246 aagtgtccccccccaatagcattgataaaccgttggtcagtacggcagcggtttgcattt 6305
Query: 661 ttgaaatgaaacaagagaacaaaactcataacagagtaacaactgtgtaaactccggtag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6306 ttgaaatgaaacaagagaacaaaactcataacagagtaacaactgtgtaaactccggtag 6365
Query: 721 atctttcttgcaagaaggcttggaattttatttagtttgcaaatagtctgtaccaaaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6366 atctttcttgcaagaaggcttggaattttatttagtttgcaaatagtctgtaccaaaacc 6425
Query: 781 tggaaagagaagaaacaacagaatgagaacgatctacgatacatgtatatgccttcgagc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6426 tggaaagagaagaaacaacagaatgagaacgatctacgatacatgtatatgccttcgagc 6485
Query: 841 tttttgaggtgttctcgcaaggagagagggcaacagaaacttcaccatcacacgaacaac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6486 tttttgaggtgttctcgcaaggagagagggcaacagaaacttcaccatcacacgaacaac 6545
Query: 901 cggtaaaaagtgcggaaatgctctccactttaaactgttgcmcgt 945
||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6546 cggtaaaaagtgcggaaatgctctccactttaaactgttgcacgt 6590
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9136
Number of Sequences: 1807
Number of extensions: 9136
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)